DiffEqParamEstim.jl: Parameter Estimation for Differential Equations

DiffEqParamEstim.jl is a package for simplified parameter estimation with DifferentialEquations.jl While not as expansive as SciMLSensitivity.jl, it's a simple and helpful for new users who want to quickly run standard parameter estimation routines for model callibration on not too large of models (<100 parameters or ODEs).

Note

For much larger models and more complex setups (multiple datasets, batching, etc.) see SciMLSensitivity.

Installation

To install DiffEqParamEstim.jl, use the Julia package manager:

using Pkg
Pkg.add("DiffEqParamEstim")

Contributing

Reproducibility

The documentation of this SciML package was built using these direct dependencies,
Status `~/work/DiffEqParamEstim.jl/DiffEqParamEstim.jl/docs/Project.toml`
  [1130ab10] DiffEqParamEstim v1.28.0 `~/work/DiffEqParamEstim.jl/DiffEqParamEstim.jl`
  [e30172f5] Documenter v0.27.23
and using this machine and Julia version.
Julia Version 1.8.2
Commit 36034abf260 (2022-09-29 15:21 UTC)
Platform Info:
  OS: Linux (x86_64-linux-gnu)
  CPU: 2 × Intel(R) Xeon(R) Platinum 8171M CPU @ 2.60GHz
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-13.0.1 (ORCJIT, skylake-avx512)
  Threads: 1 on 2 virtual cores
A more complete overview of all dependencies and their versions is also provided.
Status `~/work/DiffEqParamEstim.jl/DiffEqParamEstim.jl/docs/Manifest.toml`
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Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`
You can also download the manifest file and the project file.